| AdvDiffConservativeMassScalarTransportRKIntegrator(std::string object_name, SAMRAI::tbox::Pointer< SAMRAI::tbox::Database > input_db) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| AdvDiffConservativeMassScalarTransportRKIntegrator()=delete | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| AdvDiffConservativeMassScalarTransportRKIntegrator(const AdvDiffConservativeMassScalarTransportRKIntegrator &from)=delete | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| computeConvectiveDerivative(SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > N_data, SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > P_half_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > U_adv_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > R_half_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > Q_half_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > G_half_data, const SAMRAI::hier::Box< NDIM > &patch_box, const double *const dx) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| computeDensityUpdate(SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > R_data, const double &a0, const SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > R0_data, const double &a1, const SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > R1_data, const double &a2, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > U_adv_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > R_half_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > S_data, const SAMRAI::hier::Box< NDIM > &patch_box, const double &dt, const double *const dx) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| computeErrorOfMassConservationEquation(SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > E_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > Rnew_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > Rold_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > U_adv_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > R_half_data, const SAMRAI::hier::Box< NDIM > &patch_box, const double &dt, const double *const dx) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_bc_coefs | IBAMR::STSMassFluxIntegrator | protected |
| d_bc_helper | IBAMR::STSMassFluxIntegrator | protected |
| d_cf_boundary | IBAMR::STSMassFluxIntegrator | protected |
| d_coarsest_ln | IBAMR::STSMassFluxIntegrator | protected |
| d_current_time | IBAMR::STSMassFluxIntegrator | protected |
| d_cycle_num | IBAMR::STSMassFluxIntegrator | protected |
| d_density_bdry_extrap_type | IBAMR::STSMassFluxIntegrator | protected |
| d_density_convective_limiter | IBAMR::STSMassFluxIntegrator | protected |
| d_density_limiter_gcw | IBAMR::STSMassFluxIntegrator | protected |
| d_density_time_stepping_type | IBAMR::STSMassFluxIntegrator | protected |
| d_dt | IBAMR::STSMassFluxIntegrator | protected |
| d_dt_prev | IBAMR::STSMassFluxIntegrator | protected |
| d_E_scratch_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_E_var | IBAMR::STSMassFluxIntegrator | protected |
| d_enable_logging | IBAMR::STSMassFluxIntegrator | protected |
| d_finest_ln | IBAMR::STSMassFluxIntegrator | protected |
| d_gamma_cc_bc_coefs | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_gamma_cc_composite_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_gamma_cc_current_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_gamma_cc_new_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_gamma_cc_scratch_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_gamma_cc_var | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_gamma_transaction_comps | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_hier_cc_data_ops | IBAMR::STSMassFluxIntegrator | protected |
| d_hier_fc_data_ops | IBAMR::STSMassFluxIntegrator | protected |
| d_hier_gamma_bdry_fill | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_hier_math_ops | IBAMR::STSMassFluxIntegrator | protected |
| d_hier_math_ops_external | IBAMR::STSMassFluxIntegrator | protected |
| d_hier_Q_bdry_fill | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_hier_rho_bdry_fill | IBAMR::STSMassFluxIntegrator | protected |
| d_hier_sc_data_ops | IBAMR::STSMassFluxIntegrator | protected |
| d_hierarchy | IBAMR::STSMassFluxIntegrator | protected |
| d_is_initialized | IBAMR::STSMassFluxIntegrator | protected |
| d_material_property_bdry_extrap_type | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_material_property_convective_limiter | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_material_property_limiter_gcw | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_N_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_new_time | IBAMR::STSMassFluxIntegrator | protected |
| d_object_name | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_Q_cc_bc_coefs | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_Q_cc_composite_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_Q_cc_current_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_Q_cc_new_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_Q_cc_scratch_idx | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_Q_cc_var | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_Q_transaction_comps | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_rho_bc_coefs | IBAMR::STSMassFluxIntegrator | protected |
| d_rho_cc_bc_coefs | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_rho_cc_var | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_rho_composite_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_rho_current_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_rho_new_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_rho_scratch_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_rho_transaction_comps | IBAMR::STSMassFluxIntegrator | protected |
| d_rho_var | IBAMR::STSMassFluxIntegrator | protected |
| d_S_fcn | IBAMR::STSMassFluxIntegrator | protected |
| d_S_scratch_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_S_var | IBAMR::STSMassFluxIntegrator | protected |
| d_solution_time | IBAMR::STSMassFluxIntegrator | protected |
| d_transport_quantity_bdry_extrap_type | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_transport_quantity_convective_limiter | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_transport_quantity_limiter_gcw | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| d_u_bc_coefs | IBAMR::STSMassFluxIntegrator | protected |
| d_V_composite_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_V_current_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_V_new_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_V_old_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_V_scratch_idx | IBAMR::STSMassFluxIntegrator | protected |
| d_V_var | IBAMR::STSMassFluxIntegrator | protected |
| deallocateSTSIntegrator() override | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | virtual |
| getHierarchyMathOps() const | IBAMR::STSMassFluxIntegrator | |
| getTimeInterval() const | IBAMR::STSMassFluxIntegrator | |
| getTimeStepSize() const | IBAMR::STSMassFluxIntegrator | |
| getUpdatedCellCenteredDensityPatchDataIndex() | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| getUpdatedDensityPatchDataIndex() | IBAMR::STSMassFluxIntegrator | |
| initializeSTSIntegrator(SAMRAI::tbox::Pointer< SAMRAI::hier::BasePatchHierarchy< NDIM > > base_hierarchy) override | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | virtual |
| integrate(double dt) override | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | virtual |
| interpolateCellQuantity(SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > Q_half_data, SAMRAI::tbox::Pointer< SAMRAI::pdat::FaceData< NDIM, double > > U_adv_data, const SAMRAI::tbox::Pointer< SAMRAI::pdat::CellData< NDIM, double > > Q_data, const SAMRAI::hier::IntVector< NDIM > &patch_lower, const SAMRAI::hier::IntVector< NDIM > &patch_upper, const SAMRAI::hier::Box< NDIM > &patch_box, const LimiterType &convective_limiter) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| operator=(const AdvDiffConservativeMassScalarTransportRKIntegrator &that)=delete | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | private |
| setCellCenteredDensityBoundaryConditions(SAMRAI::solv::RobinBcCoefStrategy< NDIM > *&rho_cc_bc_coefs) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| setCellCenteredMaterialPropertyBoundaryConditions(SAMRAI::solv::RobinBcCoefStrategy< NDIM > *&gamma_cc_bc_coefs) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| setCellCenteredMaterialPropertyPatchDataIndex(int gamma_cc_idx) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| setCellCenteredTransportQuantityBoundaryConditions(SAMRAI::solv::RobinBcCoefStrategy< NDIM > *&Q_cc_bc_coefs) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| setCellCenteredTransportQuantityPatchDataIndex(int Q_cc_idx) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| setConvectiveDerivativePatchDataIndex(int N_idx) | IBAMR::STSMassFluxIntegrator | |
| setCycleNumber(int cycle_num) | IBAMR::STSMassFluxIntegrator | |
| setDensityBoundaryConditions(const std::vector< SAMRAI::solv::RobinBcCoefStrategy< NDIM > * > &rho_sc_bc_coefs) | IBAMR::STSMassFluxIntegrator | |
| setDensityPatchDataIndex(int rho_idx) | IBAMR::STSMassFluxIntegrator | |
| setFluidVelocityPatchDataIndices(int V_old_idx, int V_current_idx, int V_new_idx) | IBAMR::STSMassFluxIntegrator | |
| setHierarchyMathOps(SAMRAI::tbox::Pointer< IBTK::HierarchyMathOps > hier_math_ops) | IBAMR::STSMassFluxIntegrator | |
| setMaterialPropertyPatchDataIndices(int gamma_current_idx, int gamma_new_idx) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| setMaterialPropertyVariable(SAMRAI::tbox::Pointer< SAMRAI::pdat::CellVariable< NDIM, double > > gamma_var) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| setPreviousTimeStepSize(double dt_prev) | IBAMR::STSMassFluxIntegrator | |
| setSolutionTime(double solution_time) | IBAMR::STSMassFluxIntegrator | |
| setTimeInterval(double current_time, double new_time) | IBAMR::STSMassFluxIntegrator | |
| setTransportQuantityPatchDataIndices(int Q_current_idx, int Q_new_idx) | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| STSMassFluxIntegrator(std::string object_name, SAMRAI::tbox::Pointer< SAMRAI::tbox::Database > input_db) | IBAMR::STSMassFluxIntegrator | |
| STSMassFluxIntegrator()=delete | IBAMR::STSMassFluxIntegrator | private |
| STSMassFluxIntegrator(const STSMassFluxIntegrator &from)=delete | IBAMR::STSMassFluxIntegrator | private |
| ~AdvDiffConservativeMassScalarTransportRKIntegrator() | IBAMR::AdvDiffConservativeMassScalarTransportRKIntegrator | |
| ~DescribedClass() | SAMRAI::tbox::DescribedClass | virtual |
| ~STSMassFluxIntegrator()=default | IBAMR::STSMassFluxIntegrator | virtual |
