| BORDER enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| BOUNDARY enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| buildEmbeddedBoundaryOnLevel(const tbox::Pointer< hier::PatchLevel< DIM > > level, const tbox::Pointer< hier::PatchHierarchy< DIM > > hierarchy=NULL, const tbox::Pointer< hier::PatchLevel< DIM > > old_level=NULL) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| calculateArea(const double *cell_lower, const double *cell_upper, const int face, double &error_estimate) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| calculateBoundaryNodeInformation(appu::CutCell< DIM > &cut_cell, tbox::Pointer< pdat::NodeData< DIM, int > > &node_flag, const double *lower, const double *upper, const double *dx) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| calculateCutCellInformation(appu::CutCell< DIM > &cut_cell, const double *lower, const double *upper, const double &fullcellvol, const double *fullareas, double &volume_error_estimate, double &area_error_estimate) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| calculateVolume(const double *cell_lower, const double *cell_upper, double &error_estimate) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| CELL_TYPE enum name | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| classifyCell(const double *lower, const double *upper) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| computeEmbeddedBoundaryOnLevel(const tbox::Pointer< hier::PatchLevel< DIM > > level, int &cut_cells_on_level, double &l2_volume_error, double &l2_area_error, double &max_volume_error, double &max_area_error) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| computeEmbeddedBoundaryOnLevelWithPackage(const tbox::Pointer< hier::PatchLevel< DIM > > level, int &cut_cells_on_level) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| computeTotalVolumeOnLevel(const tbox::Pointer< hier::PatchLevel< DIM > > level) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| CUT enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| d_cell_flag_data_id | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_cell_flag_scratch_id | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_cell_flag_var | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_cell_vol_data_id | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_cell_vol_scratch_id | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_cell_vol_var | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_compute_areas_and_normal | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_compute_boundary_node_data | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_compute_cutcell_index_data | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_cubes_interface | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_ebdry_data_id | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_ebdry_dirname | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_ebdry_nghosts | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_ebdry_refine_alg | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_ebdry_scratch_id | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_ebdry_var | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_edge_bdry_cond | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_eleven_interface | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_face_bdry_cond | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_flow_type | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_grid_geometry | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_level_ratios | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_max_levels | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_max_subdivides | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_node_bdry_cond | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_node_flag_data_id | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_node_flag_var | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_object_name | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_ratio_to_coarser | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_read_ebdry | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_shapes | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_step_count | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_use_cubes | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_use_eleven_boundary_node | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_use_eleven_inside_outside | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_use_recursive_algs | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_verbose | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_visit_writer | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| d_write_ebdry | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| doNativeShapeInsideOutside(const int *nx, const double *dx, const double *origin, int *node_flag) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| EmbeddedBoundaryGeometry(const std::string &object_name, tbox::Pointer< tbox::Database > input_db=NULL, const tbox::Pointer< geom::CartesianGridGeometry< DIM > > grid_geom=NULL, const hier::IntVector< DIM > &nghosts=hier::IntVector< DIM >(0)) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| FLOW enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| getCellFlagDataId() const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| getCellVolumeDataId() const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| getFromInput(tbox::Pointer< tbox::Database > db, const bool is_from_restart) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| getFromRestart() | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| getIndexCutCellDataId() const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| getNodeInsideOutsideDataId() const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| getRefineOpStencilWidth() const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | virtual |
| initializeVariables(const hier::IntVector< DIM > &nghosts) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| INSIDE enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| NODE_TYPE enum name | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| ONBOUNDARY enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| OUTSIDE enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| PACK_RETURN_TYPE enum name | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | |
| packMaterialFractionsIntoDoubleBuffer(double *dbuffer, const hier::Patch< DIM > &patch, const hier::Box< DIM > ®ion, const std::string &material_name) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | virtual |
| packMaterialFractionsIntoSparseBuffers(int *mat_list, std::vector< int > &mix_zones, std::vector< int > &mix_mat, std::vector< double > &vol_fracs, std::vector< int > &next_mat, const hier::Patch< DIM > &patch, const hier::Box< DIM > ®ion) const | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | virtual |
| packSpeciesFractionsIntoDoubleBuffer(double *buffer, const hier::Patch< DIM > &patch, const hier::Box< DIM > ®ion, const std::string &material_name, const std::string &species_name) const | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | virtual |
| postprocessRefine(hier::Patch< DIM > &fine, const hier::Patch< DIM > &coarse, const hier::Box< DIM > &fine_box, const hier::IntVector< DIM > &ratio) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | virtual |
| postprocessRefineBoxes(hier::Patch< DIM > &fine, const hier::Patch< DIM > &coarse, const hier::BoxList< DIM > &fine_boxes, const hier::IntVector< DIM > &ratio) | SAMRAI::xfer::RefinePatchStrategy< DIM > | virtual |
| preprocessRefine(hier::Patch< DIM > &fine, const hier::Patch< DIM > &coarse, const hier::Box< DIM > &fine_box, const hier::IntVector< DIM > &ratio) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | inlinevirtual |
| preprocessRefineBoxes(hier::Patch< DIM > &fine, const hier::Patch< DIM > &coarse, const hier::BoxList< DIM > &fine_boxes, const hier::IntVector< DIM > &ratio) | SAMRAI::xfer::RefinePatchStrategy< DIM > | virtual |
| putToDatabase(tbox::Pointer< tbox::Database > db) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | virtual |
| readLevelEmbeddedBoundaryDataFromFile(const tbox::Pointer< hier::PatchLevel< DIM > > level, const std::string &dirname) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| recursiveCalculateArea(const double *cell_lower, const double *cell_upper, const int face, double &area, double &error_estimate, int &subdivide_level) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| recursiveCalculateVolume(const double *cell_lower, const double *cell_upper, double &volume, double &error_estimate, int &subdivide_level) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| refineEmbeddedBoundary(const tbox::Pointer< hier::PatchLevel< DIM > > level, const tbox::Pointer< hier::PatchLevel< DIM > > old_level=NULL, const tbox::Pointer< hier::PatchHierarchy< DIM > > hierarchy=NULL) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| RefinePatchStrategy() | SAMRAI::xfer::RefinePatchStrategy< DIM > | |
| registerVisItDataWriter(tbox::Pointer< appu::VisItDataWriter< DIM > > visit_writer) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| Serializable() | SAMRAI::tbox::Serializable | |
| setEmbeddedBoundaryAtPhysicalBoundaries(const tbox::Pointer< hier::PatchLevel< DIM > > level) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| setGridGeometry(const tbox::Pointer< geom::CartesianGridGeometry< DIM > > grid_geom) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| setLevelRatioInformation(const tbox::Pointer< hier::PatchLevel< DIM > > level) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| setPhysicalBoundaryConditions(hier::Patch< DIM > &patch, const double fill_time, const hier::IntVector< DIM > &ghost_width_to_fill) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | virtual |
| SOLID enum value | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| t_calc_area | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| t_calc_boundary_node | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| t_calc_node_inout | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| t_calc_volume | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| t_compute_eb | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| t_eb_phys_bdry | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| t_read_write_eb | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | private |
| tagInsideOutsideNodesOnLevel(const tbox::Pointer< hier::PatchLevel< DIM > > level) | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| VISIT_ALLONE enum value | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | |
| VISIT_ALLZERO enum value | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | |
| VISIT_MIXED enum value | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | |
| VisMaterialsDataStrategy() | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | |
| writeLevelEmbeddedBoundaryDataToFile(const tbox::Pointer< hier::PatchLevel< DIM > > level, const std::string &dirname) const | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| ~DescribedClass() | SAMRAI::tbox::DescribedClass | virtual |
| ~EmbeddedBoundaryGeometry() | SAMRAI::appu::EmbeddedBoundaryGeometry< DIM > | |
| ~RefinePatchStrategy() | SAMRAI::xfer::RefinePatchStrategy< DIM > | virtual |
| ~Serializable() | SAMRAI::tbox::Serializable | virtual |
| ~VisMaterialsDataStrategy() | SAMRAI::appu::VisMaterialsDataStrategy< DIM > | virtual |
