IBAMR
An adaptive and distributed-memory parallel implementation of the immersed boundary (IB) method
Public Member Functions | List of all members
IBTK::LinearOperator Class Reference

Class LinearOperator provides an abstract interface for the specification of linear operators to compute $ y=Ax $ and $ z=Ax+y $ and, optionally, $ y=A^{T} x $ and $ z=A^{T}x+y $. More...

#include </home/runner/work/IBAMR/IBAMR/ibtk/include/ibtk/LinearOperator.h>

Inheritance diagram for IBTK::LinearOperator:
Inheritance graph
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Public Member Functions

 LinearOperator (std::string object_name, bool homogeneous_bc=false)
 Constructor.
 
 ~LinearOperator ()
 Empty destructor.
 
- Public Member Functions inherited from IBTK::GeneralOperator
 GeneralOperator (std::string object_name, bool homogeneous_bc=false)
 Constructor.
 
virtual ~GeneralOperator ()
 Empty virtual destructor.
 
const std::stringgetName () const
 Return the object name.
 
virtual bool getIsInitialized () const
 Return whether the operator is initialized.
 
virtual void setHomogeneousBc (bool homogeneous_bc)
 Set whether the operator should use homogeneous boundary conditions.
 
virtual bool getHomogeneousBc () const
 Return whether the operator is using homogeneous boundary conditions.
 
virtual void setSolutionTime (double solution_time)
 Set the time at which the solution is to be evaluated.
 
virtual double getSolutionTime () const
 Get the time at which the solution is being evaluated.
 
virtual void setTimeInterval (double current_time, double new_time)
 Set the current time interval.
 
virtual std::pair< double, double > getTimeInterval () const
 Get the current time interval.
 
virtual double getDt () const
 Get the current time step size.
 
virtual void setHierarchyMathOps (SAMRAI::tbox::Pointer< HierarchyMathOps > hier_math_ops)
 Set the HierarchyMathOps object used by the operator.
 
virtual SAMRAI::tbox::Pointer< HierarchyMathOpsgetHierarchyMathOps () const
 Get the HierarchyMathOps object used by the operator.
 
virtual void apply (SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &x, SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &y)=0
 Compute $y=F[x]$. More...
 
virtual void applyAdd (SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &x, SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &y, SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &z)
 Compute $z=F[x]+y$. More...
 
virtual void initializeOperatorState (const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &in, const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &out)
 Compute hierarchy dependent data required for computing y=F[x] and z=F[x]+y. More...
 
virtual void deallocateOperatorState ()
 Remove all hierarchy dependent data allocated by initializeOperatorState(). More...
 
virtual void imposeSolBcs (SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &u)
 Impose boudary conditions in the solution vector. More...
 
virtual void setLoggingEnabled (bool enable_logging=true)
 Enable or disable logging.
 
virtual bool getLoggingEnabled () const
 Determine whether logging is enabled or disabled.
 
virtual void printClassData (std::ostream &stream)
 Print class data to stream.
 

Linear operator functionality.

void modifyRhsForBcs (SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &y) override
 Modify y to account for boundary conditions. More...
 

Additional Inherited Members

- Protected Attributes inherited from IBTK::GeneralOperator
const std::string d_object_name
 
bool d_is_initialized = false
 
bool d_homogeneous_bc
 
double d_solution_time = std::numeric_limits<double>::quiet_NaN()
 
double d_current_time = std::numeric_limits<double>::quiet_NaN()
 
double d_new_time = std::numeric_limits<double>::quiet_NaN()
 
SAMRAI::tbox::Pointer< HierarchyMathOpsd_hier_math_ops
 
bool d_hier_math_ops_external = false
 
bool d_enable_logging = false
 

Detailed Description

Class LinearOperator provides an abstract interface for the specification of linear operators to compute $ y=Ax $ and $ z=Ax+y $ and, optionally, $ y=A^{T} x $ and $ z=A^{T}x+y $.

Member Function Documentation

◆ modifyRhsForBcs()

void IBTK::LinearOperator::modifyRhsForBcs ( SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &  y)
overridevirtual

Modify y to account for boundary conditions.

Before calling this function, the form of the vector y should be set properly by the user on all patch interiors on the range of levels covered by the operator. All data in this vector should be allocated. The user is responsible for managing the storage for the vectors.

Note
The operator MUST be initialized prior to calling modifyRhsForBcs.
See also
initializeOperatorState
Note
A default implementation evaluates y := y - A*0.

Reimplemented from IBTK::GeneralOperator.


The documentation for this class was generated from the following files: