IBAMR
An adaptive and distributed-memory parallel implementation of the immersed boundary (IB) method
Public Member Functions | List of all members
IBTK::PETScPCLSWrapper Class Reference

Class PETScPCLSWrapper provides a LinearSolver interface for a PETSc PC object. More...

#include </home/runner/work/IBAMR/IBAMR/ibtk/include/ibtk/PETScPCLSWrapper.h>

Inheritance diagram for IBTK::PETScPCLSWrapper:
Inheritance graph
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Public Member Functions

 PETScPCLSWrapper (std::string object_name, PC petsc_pc)
 Constructor. More...
 
 ~PETScPCLSWrapper ()
 Destructor. More...
 
Functions to access the underlying PETSc PC object.
const PC & getPETScPC () const
 Get the PETSc PC object "wrapped" by this object.
 
Linear solver functionality.
bool solveSystem (SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &x, SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &b) override
 Solve the linear system of equations $Ax=b$ for $x$. More...
 
void initializeSolverState (const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &x, const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &b) override
 Compute hierarchy dependent data required for solving $Ax=b$. More...
 
void deallocateSolverState () override
 Remove all hierarchy dependent data allocated by initializeSolverState(). More...
 
Functions to access solver parameters.
void setInitialGuessNonzero (bool initial_guess_nonzero=true) override
 Set whether the initial guess is non-zero. More...
 
bool getInitialGuessNonzero () const override
 Get whether the initial guess is non-zero. More...
 
void setMaxIterations (int max_iterations) override
 Set the maximum number of iterations to use per solve. More...
 
int getMaxIterations () const override
 Get the maximum number of iterations to use per solve. More...
 
void setAbsoluteTolerance (double abs_residual_tol) override
 Set the absolute residual tolerance for stopping. More...
 
double getAbsoluteTolerance () const override
 Get the absolute residual tolerance for stopping. More...
 
void setRelativeTolerance (double rel_residual_tol) override
 Set the relative residual tolerance for stopping. More...
 
double getRelativeTolerance () const override
 Get the relative residual tolerance for stopping. More...
 
- Public Member Functions inherited from IBTK::LinearSolver
 LinearSolver ()
 Constructor.
 
virtual ~LinearSolver ()
 Empty virtual destructor.
 
virtual void setNullspace (bool nullspace_contains_constant_vec, const std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > > &nullspace_basis_vecs=std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > >())
 Set the nullspace of the linear system. More...
 
virtual bool getNullspaceContainsConstantVector () const
 Get whether the nullspace of the linear system contains th constant vector.
 
virtual const std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > > & getNullspaceBasisVectors () const
 Get the basis vectors for the nullspace of the linear system.
 
virtual void printClassData (std::ostream &stream) override
 Print class data to stream.
 
- Public Member Functions inherited from IBTK::GeneralSolver
 GeneralSolver ()=default
 Constructor.
 
virtual ~GeneralSolver ()=default
 Empty virtual destructor.
 
const std::stringgetName () const
 Return the object name.
 
virtual bool getIsInitialized () const
 Return whether the operator is initialized.
 
virtual void setHomogeneousBc (bool homogeneous_bc)
 Set whether the solver should use homogeneous boundary conditions.
 
virtual bool getHomogeneousBc () const
 Return whether the solver is using homogeneous boundary conditions.
 
virtual void setSolutionTime (double solution_time)
 Set the time at which the solution is to be evaluated.
 
virtual double getSolutionTime () const
 Get the time at which the solution is being evaluated.
 
virtual void setTimeInterval (double current_time, double new_time)
 Set the current time interval.
 
virtual std::pair< double, double > getTimeInterval () const
 Get the current time interval.
 
virtual double getDt () const
 Get the current time step size.
 
virtual void setHierarchyMathOps (SAMRAI::tbox::Pointer< HierarchyMathOps > hier_math_ops)
 Set the HierarchyMathOps object used by the solver.
 
virtual SAMRAI::tbox::Pointer< HierarchyMathOpsgetHierarchyMathOps () const
 Get the HierarchyMathOps object used by the solver.
 
virtual void setLoggingEnabled (bool enable_logging=true)
 Enable or disable logging.
 
virtual bool getLoggingEnabled () const
 Determine whether logging is enabled or disabled.
 

Functions to access data on the most recent solve.

int getNumIterations () const override
 Return the iteration count from the most recent linear solve. More...
 
double getResidualNorm () const override
 Return the residual norm from the most recent iteration. More...
 

Additional Inherited Members

- Protected Member Functions inherited from IBTK::GeneralSolver
void init (const std::string &object_name, bool homogeneous_bc)
 
virtual void initSpecialized (const std::string &object_name, bool homogeneous_bc)
 
- Protected Attributes inherited from IBTK::LinearSolver
bool d_initial_guess_nonzero = true
 
bool d_nullspace_contains_constant_vec = false
 
std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > > d_nullspace_basis_vecs
 
- Protected Attributes inherited from IBTK::GeneralSolver
std::string d_object_name = "unitialized"
 
bool d_is_initialized = false
 
bool d_homogeneous_bc = false
 
double d_solution_time = std::numeric_limits<double>::quiet_NaN()
 
double d_current_time = std::numeric_limits<double>::quiet_NaN()
 
double d_new_time = std::numeric_limits<double>::quiet_NaN()
 
double d_rel_residual_tol = 0.0
 
double d_abs_residual_tol = 0.0
 
int d_max_iterations = 100
 
int d_current_iterations = 0
 
double d_current_residual_norm = std::numeric_limits<double>::quiet_NaN()
 
SAMRAI::tbox::Pointer< HierarchyMathOpsd_hier_math_ops
 
bool d_hier_math_ops_external = false
 
bool d_enable_logging = false
 

Detailed Description

Class PETScPCLSWrapper provides a LinearSolver interface for a PETSc PC object.

Constructor & Destructor Documentation

◆ PETScPCLSWrapper()

IBTK::PETScPCLSWrapper::PETScPCLSWrapper ( std::string  object_name,
PC  petsc_pc 
)

Constructor.

Parameters
object_namename of the solver
petsc_pcPETSc PC object "wrapped" by this object

◆ ~PETScPCLSWrapper()

IBTK::PETScPCLSWrapper::~PETScPCLSWrapper ( )

Destructor.

Note
The argument petsc_pc provided to the class constructor is not deallocated by the class destructor.

Member Function Documentation

◆ deallocateSolverState()

void IBTK::PETScPCLSWrapper::deallocateSolverState ( )
overridevirtual

Remove all hierarchy dependent data allocated by initializeSolverState().

Note
It is safe to call deallocateSolverState() when the solver state is already deallocated.
See also
initializeSolverState

Reimplemented from IBTK::GeneralSolver.

◆ getAbsoluteTolerance()

double IBTK::PETScPCLSWrapper::getAbsoluteTolerance ( ) const
overridevirtual

Get the absolute residual tolerance for stopping.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ getInitialGuessNonzero()

bool IBTK::PETScPCLSWrapper::getInitialGuessNonzero ( ) const
overridevirtual

Get whether the initial guess is non-zero.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::LinearSolver.

◆ getMaxIterations()

int IBTK::PETScPCLSWrapper::getMaxIterations ( ) const
overridevirtual

Get the maximum number of iterations to use per solve.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ getNumIterations()

int IBTK::PETScPCLSWrapper::getNumIterations ( ) const
overridevirtual

Return the iteration count from the most recent linear solve.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ getRelativeTolerance()

double IBTK::PETScPCLSWrapper::getRelativeTolerance ( ) const
overridevirtual

Get the relative residual tolerance for stopping.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ getResidualNorm()

double IBTK::PETScPCLSWrapper::getResidualNorm ( ) const
overridevirtual

Return the residual norm from the most recent iteration.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ initializeSolverState()

void IBTK::PETScPCLSWrapper::initializeSolverState ( const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &  x,
const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &  b 
)
overridevirtual

Compute hierarchy dependent data required for solving $Ax=b$.

By default, the solveSystem() method computes some required hierarchy dependent data before solving and removes that data after the solve. For multiple solves that use the same hierarchy configuration, it is more efficient to:

  1. initialize the hierarchy-dependent data required by the solver via initializeSolverState(),
  2. solve the system one or more times via solveSystem(), and
  3. remove the hierarchy-dependent data via deallocateSolverState().

Note that it is generally necessary to reinitialize the solver state when the hierarchy configuration changes.

Parameters
xsolution vector
bright-hand-side vector

Conditions on Parameters:

  • vectors x and b must have same patch hierarchy
  • vectors x and b must have same structure, depth, etc.
Note
The vector arguments for solveSystem() need not match those for initializeSolverState(). However, there must be a certain degree of similarity, including:
  • hierarchy configuration (hierarchy pointer and range of levels)
  • number, type and alignment of vector component data
  • ghost cell widths of data in the solution x and right-hand-side b vectors
Note
It is safe to call initializeSolverState() when the state is already initialized. In this case, the solver state is first deallocated and then reinitialized.
See also
deallocateSolverState

Reimplemented from IBTK::GeneralSolver.

◆ setAbsoluteTolerance()

void IBTK::PETScPCLSWrapper::setAbsoluteTolerance ( double  abs_residual_tol)
overridevirtual

Set the absolute residual tolerance for stopping.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ setInitialGuessNonzero()

void IBTK::PETScPCLSWrapper::setInitialGuessNonzero ( bool  initial_guess_nonzero = true)
overridevirtual

Set whether the initial guess is non-zero.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::LinearSolver.

◆ setMaxIterations()

void IBTK::PETScPCLSWrapper::setMaxIterations ( int  max_iterations)
overridevirtual

Set the maximum number of iterations to use per solve.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ setRelativeTolerance()

void IBTK::PETScPCLSWrapper::setRelativeTolerance ( double  rel_residual_tol)
overridevirtual

Set the relative residual tolerance for stopping.

Warning
Not supported. If called, a warning will be printed via SAMRAI::TBOX_WARNING.

Reimplemented from IBTK::GeneralSolver.

◆ solveSystem()

bool IBTK::PETScPCLSWrapper::solveSystem ( SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &  x,
SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &  b 
)
overridevirtual

Solve the linear system of equations $Ax=b$ for $x$.

Before calling solveSystem(), the form of the solution x and right-hand-side b vectors must be set properly by the user on all patch interiors on the specified range of levels in the patch hierarchy. The user is responsible for all data management for the quantities associated with the solution and right-hand-side vectors. In particular, patch data in these vectors must be allocated prior to calling this method.

Parameters
xsolution vector
bright-hand-side vector

Conditions on Parameters:

  • vectors x and b must have same patch hierarchy
  • vectors x and b must have same structure, depth, etc.
Returns
true if the solver converged to the specified tolerances, false otherwise

Implements IBTK::GeneralSolver.


The documentation for this class was generated from the following files: