IBAMR
An adaptive and distributed-memory parallel implementation of the immersed boundary (IB) method
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IBAMR::PETScKrylovStaggeredStokesSolver Class Reference

Class PETScKrylovStaggeredStokesSolver is an extension of class PETScKrylovLinearSolver that provides an implementation of the StaggeredStokesSolver interface. More...

#include </home/runner/work/IBAMR/IBAMR/include/ibamr/PETScKrylovStaggeredStokesSolver.h>

Inheritance diagram for IBAMR::PETScKrylovStaggeredStokesSolver:
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Public Member Functions

 PETScKrylovStaggeredStokesSolver (const std::string &object_name, SAMRAI::tbox::Pointer< SAMRAI::tbox::Database > input_db, const std::string &default_options_prefix)
 Constructor.
 
 ~PETScKrylovStaggeredStokesSolver ()=default
 Destructor.
 
- Public Member Functions inherited from IBTK::PETScKrylovLinearSolver
 PETScKrylovLinearSolver (std::string object_name, SAMRAI::tbox::Pointer< SAMRAI::tbox::Database > input_db, std::string default_options_prefix, MPI_Comm petsc_comm=PETSC_COMM_WORLD)
 Constructor for a concrete KrylovLinearSolver that employs the PETSc KSP solver framework.
 
 PETScKrylovLinearSolver (std::string object_name, const KSP &petsc_ksp)
 Constructor for a concrete KrylovLinearSolver that acts as a "wrapper" for a supplied PETSc KSP object. More...
 
 ~PETScKrylovLinearSolver ()
 Destructor.
 
void setKSPType (const std::string &ksp_type)
 Set the KSP type.
 
void setOptionsPrefix (const std::string &options_prefix)
 Set the options prefix used by this PETSc solver object.
 
const KSP & getPETScKSP () const
 Get the PETSc KSP object.
 
void setOperator (SAMRAI::tbox::Pointer< LinearOperator > A) override
 Set the linear operator used when solving $Ax=b$.
 
void setPreconditioner (SAMRAI::tbox::Pointer< LinearSolver > pc_solver=NULL) override
 Set the preconditioner used by the Krylov subspace method when solving $Ax=b$. More...
 
void setNullspace (bool contains_constant_vec, const std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > > &nullspace_basis_vecs=std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > >()) override
 Set the nullspace of the linear system. More...
 
bool solveSystem (SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &x, SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &b) override
 Solve the linear system of equations $Ax=b$ for $x$. More...
 
void initializeSolverState (const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &x, const SAMRAI::solv::SAMRAIVectorReal< NDIM, double > &b) override
 Compute hierarchy dependent data required for solving $Ax=b$. More...
 
void deallocateSolverState () override
 Remove all hierarchy dependent data allocated by initializeSolverState(). More...
 
- Public Member Functions inherited from IBTK::KrylovLinearSolver
 KrylovLinearSolver ()=default
 Default constructor.
 
 ~KrylovLinearSolver ()=default
 Empty destructor.
 
void setHierarchyMathOps (SAMRAI::tbox::Pointer< HierarchyMathOps > hier_math_ops) override
 Set the HierarchyMathOps object used by the solver.
 
void setHomogeneousBc (bool homogeneous_bc) override
 Set whether the solver should use homogeneous boundary conditions.
 
void setSolutionTime (double solution_time) override
 Set the time at which the solution is to be evaluated.
 
void setTimeInterval (double current_time, double new_time) override
 Set the current time interval.
 
virtual SAMRAI::tbox::Pointer< LinearOperatorgetOperator () const
 Retrieve the linear operator used when solving $Ax=b$.
 
virtual SAMRAI::tbox::Pointer< LinearSolvergetPreconditioner () const
 Retrieve the preconditioner used by the Krylov subspace method when solving $Ax=b$.
 
- Public Member Functions inherited from IBTK::LinearSolver
 LinearSolver ()
 Constructor.
 
virtual ~LinearSolver ()
 Empty virtual destructor.
 
virtual bool getNullspaceContainsConstantVector () const
 Get whether the nullspace of the linear system contains th constant vector.
 
virtual const std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > > & getNullspaceBasisVectors () const
 Get the basis vectors for the nullspace of the linear system.
 
virtual void setInitialGuessNonzero (bool initial_guess_nonzero=true)
 Set whether the initial guess is non-zero.
 
virtual bool getInitialGuessNonzero () const
 Get whether the initial guess is non-zero.
 
virtual void printClassData (std::ostream &stream) override
 Print class data to stream.
 
- Public Member Functions inherited from IBTK::GeneralSolver
 GeneralSolver ()=default
 Constructor.
 
virtual ~GeneralSolver ()=default
 Empty virtual destructor.
 
const std::stringgetName () const
 Return the object name.
 
virtual bool getIsInitialized () const
 Return whether the operator is initialized.
 
virtual bool getHomogeneousBc () const
 Return whether the solver is using homogeneous boundary conditions.
 
virtual double getSolutionTime () const
 Get the time at which the solution is being evaluated.
 
virtual std::pair< double, double > getTimeInterval () const
 Get the current time interval.
 
virtual double getDt () const
 Get the current time step size.
 
virtual SAMRAI::tbox::Pointer< HierarchyMathOpsgetHierarchyMathOps () const
 Get the HierarchyMathOps object used by the solver.
 
virtual void setMaxIterations (int max_iterations)
 Set the maximum number of nonlinear iterations to use per solve.
 
virtual int getMaxIterations () const
 Get the maximum number of nonlinear iterations to use per solve.
 
virtual void setAbsoluteTolerance (double abs_residual_tol)
 Set the absolute residual tolerance for convergence.
 
virtual double getAbsoluteTolerance () const
 Get the absolute residual tolerance for convergence.
 
virtual void setRelativeTolerance (double rel_residual_tol)
 Set the relative residual tolerance for convergence.
 
virtual double getRelativeTolerance () const
 Get the relative residual tolerance for convergence.
 
virtual int getNumIterations () const
 Return the iteration count from the most recent solve.
 
virtual double getResidualNorm () const
 Return the residual norm from the most recent iteration.
 
virtual void setLoggingEnabled (bool enable_logging=true)
 Enable or disable logging.
 
virtual bool getLoggingEnabled () const
 Determine whether logging is enabled or disabled.
 
- Public Member Functions inherited from IBAMR::KrylovLinearSolverStaggeredStokesSolverInterface
 KrylovLinearSolverStaggeredStokesSolverInterface ()=default
 
 ~KrylovLinearSolverStaggeredStokesSolverInterface ()=default
 
void setVelocityPoissonSpecifications (const SAMRAI::solv::PoissonSpecifications &U_problem_coefs) override
 Set the PoissonSpecifications object used to specify the coefficients for the momentum equation in the incompressible Stokes operator.
 
void setComponentsHaveNullspace (const bool has_velocity_nullspace, const bool has_pressure_nullspace) override
 Set if velocity and pressure have nullspace.
 
void setPhysicalBcCoefs (const std::vector< SAMRAI::solv::RobinBcCoefStrategy< NDIM > * > &U_bc_coefs, SAMRAI::solv::RobinBcCoefStrategy< NDIM > *P_bc_coef) override
 Set the SAMRAI::solv::RobinBcCoefStrategy objects used to specify physical boundary conditions. More...
 
void setPhysicalBoundaryHelper (SAMRAI::tbox::Pointer< StaggeredStokesPhysicalBoundaryHelper > bc_helper) override
 Set the StokesSpecifications object and timestep size used to specify the coefficients for the time-dependent incompressible Stokes operator.
 
- Public Member Functions inherited from IBAMR::StaggeredStokesSolver
 StaggeredStokesSolver ()
 Deafult constructor.
 
 ~StaggeredStokesSolver ()=default
 Destructor.
 

Additional Inherited Members

- Static Public Member Functions inherited from IBTK::PETScKrylovLinearSolver
static SAMRAI::tbox::Pointer< KrylovLinearSolverallocate_solver (const std::string &object_name, SAMRAI::tbox::Pointer< SAMRAI::tbox::Database > input_db, const std::string &default_options_prefix)
 Static function to construct a PETScKrylovLinearSolver.
 
- Protected Member Functions inherited from IBTK::GeneralSolver
void init (const std::string &object_name, bool homogeneous_bc)
 
virtual void initSpecialized (const std::string &object_name, bool homogeneous_bc)
 
- Protected Attributes inherited from IBTK::KrylovLinearSolver
SAMRAI::tbox::Pointer< LinearOperatord_A
 
SAMRAI::tbox::Pointer< LinearSolverd_pc_solver
 
SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > d_x
 
SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > d_b
 
- Protected Attributes inherited from IBTK::LinearSolver
bool d_initial_guess_nonzero = true
 
bool d_nullspace_contains_constant_vec = false
 
std::vector< SAMRAI::tbox::Pointer< SAMRAI::solv::SAMRAIVectorReal< NDIM, double > > > d_nullspace_basis_vecs
 
- Protected Attributes inherited from IBTK::GeneralSolver
std::string d_object_name = "unitialized"
 
bool d_is_initialized = false
 
bool d_homogeneous_bc = false
 
double d_solution_time = std::numeric_limits<double>::quiet_NaN()
 
double d_current_time = std::numeric_limits<double>::quiet_NaN()
 
double d_new_time = std::numeric_limits<double>::quiet_NaN()
 
double d_rel_residual_tol = 0.0
 
double d_abs_residual_tol = 0.0
 
int d_max_iterations = 100
 
int d_current_iterations = 0
 
double d_current_residual_norm = std::numeric_limits<double>::quiet_NaN()
 
SAMRAI::tbox::Pointer< HierarchyMathOpsd_hier_math_ops
 
bool d_hier_math_ops_external = false
 
bool d_enable_logging = false
 
- Protected Attributes inherited from IBAMR::StaggeredStokesSolver
SAMRAI::solv::PoissonSpecifications d_U_problem_coefs
 
SAMRAI::solv::LocationIndexRobinBcCoefs< NDIM > d_default_U_bc_coef
 
std::vector< SAMRAI::solv::RobinBcCoefStrategy< NDIM > * > d_U_bc_coefs
 
SAMRAI::solv::LocationIndexRobinBcCoefs< NDIM > d_default_P_bc_coef
 
SAMRAI::solv::RobinBcCoefStrategy< NDIM > * d_P_bc_coef
 
SAMRAI::tbox::Pointer< StaggeredStokesPhysicalBoundaryHelperd_bc_helper
 
bool d_has_velocity_nullspace = false
 
bool d_has_pressure_nullspace = false
 

Detailed Description

Class PETScKrylovStaggeredStokesSolver is an extension of class PETScKrylovLinearSolver that provides an implementation of the StaggeredStokesSolver interface.


The documentation for this class was generated from the following files: