Here is a list of all documented class members with links to the class documentation for each member:
- r -
- rdvToEigen() : IBAMR::CIBStrategy
- rdvToVec() : IBAMR::CIBStrategy
- readInstrumentData() : IBAMR::IBInstrumentPanel
- recv() : IBTK::IBTK_MPI
- recvBytes() : IBTK::IBTK_MPI
- reference : IBTK::LSet< T >
- refine() : IBTK::CartCellDoubleBoundsPreservingConservativeLinearRefine, IBTK::CartCellDoubleQuadraticRefine, IBTK::CartSideDoubleRT0Refine, IBTK::CartSideDoubleSpecializedLinearRefine
- REFINE_OP_STENCIL_WIDTH : IBTK::CartSideDoubleDivPreservingRefine
- RefinePatchStrategySet() : IBTK::RefinePatchStrategySet
- registerAdvDiffHierarchyIntegrator() : IBAMR::INSHierarchyIntegrator
- registerAdvectionVelocity() : IBAMR::AdvDiffHierarchyIntegrator, IBAMR::AdvectorPredictorCorrectorHyperbolicPatchOps
- registerApplyGradientDetectorCallback() : IBTK::HierarchyIntegrator
- registerBodyForceFunction() : IBAMR::IBHierarchyIntegrator, IBAMR::INSHierarchyIntegrator
- registerBrinkmanAdvDiffBcHelper() : IBAMR::BrinkmanAdvDiffSemiImplicitHierarchyIntegrator
- registerBrinkmanPenalizationStrategy() : IBAMR::INSVCStaggeredHierarchyIntegrator
- registerCFStrategy() : IBAMR::CFINSForcing, IBAMR::CFUpperConvectiveOperator
- registerChildHierarchyIntegrator() : IBTK::HierarchyIntegrator
- registerCoarsenAlgorithm() : IBAMR::IBStrategy, IBTK::HierarchyIntegrator
- registerConstrainedVelocityFunction() : IBAMR::CIBMethod
- registerConstraintIBKinematics() : IBAMR::ConstraintIBMethod
- registerCoordsData() : IBTK::LSiloDataWriter
- registerDiffusionCoefficientVariable() : IBAMR::AdvDiffHierarchyIntegrator
- registerDisconElemFamilyForPressureJump() : IBAMR::IIMethod
- registerDisconElemFamilyForTraction() : IBAMR::IIMethod
- registerDisconElemFamilyForViscousJump() : IBAMR::IIMethod
- registerEulerianCommunicationAlgorithms() : IBAMR::CIBMethod, IBAMR::GeneralizedIBMethod, IBAMR::IBInterpolantMethod, IBAMR::IBLevelSetMethod, IBAMR::IBStrategy, IBAMR::IBStrategySet
- registerEulerianVariables() : IBAMR::CIBMethod, IBAMR::ConstraintIBMethod, IBAMR::GeneralizedIBMethod, IBAMR::IBInterpolantMethod, IBAMR::IBLevelSetMethod, IBAMR::IBStrategy, IBAMR::IBStrategySet, IBAMR::IIMethod
- registerExternalForceTorqueFunction() : IBAMR::CIBMethod
- registerFactory() : IBTK::StreamableManager
- registerFluidSourceFunction() : IBAMR::INSHierarchyIntegrator
- registerGhostfillRefineAlgorithm() : IBAMR::IBStrategy, IBTK::HierarchyIntegrator
- registerHomogeneousBC() : IBAMR::BrinkmanAdvDiffBcHelper
- registerIBHierarchyIntegrator() : IBAMR::IBLevelSetMethod, IBAMR::IBStrategy, IBAMR::IBStrategySet
- registerIBKirchhoffRodForceGen() : IBAMR::GeneralizedIBMethod
- registerIBLagrangianForceFunction() : IBAMR::IBMethod
- registerIBLagrangianSourceFunction() : IBAMR::IBMethod
- registerIBMethodPostProcessor() : IBAMR::IBMethod
- registerInhomogeneousBC() : IBAMR::BrinkmanAdvDiffBcHelper
- registerInitAnchorPtFunction() : IBAMR::IBRedundantInitializer
- registerInitBeamDataFunction() : IBAMR::IBRedundantInitializer
- registerInitBoundaryMassFunction() : IBAMR::IBRedundantInitializer
- registerInitDirectorAndRodFunction() : IBAMR::IBRedundantInitializer
- registerInitialCoordinateMappingFunction() : IBAMR::IIMethod
- registerInitialVelocityFunction() : IBAMR::IIMethod
- registerInitInstrumentationFunction() : IBAMR::IBRedundantInitializer
- registerInitSourceFunction() : IBAMR::IBRedundantInitializer
- registerInitSpringDataFunction() : IBAMR::IBRedundantInitializer
- registerInitStructureFunction() : IBAMR::IBRedundantInitializer
- registerInitTargetPtFunction() : IBAMR::IBRedundantInitializer
- registerInitXSpringDataFunction() : IBAMR::IBRedundantInitializer
- registerIntegrateHierarchyCallback() : IBTK::HierarchyIntegrator
- registerInterfaceNeighborhoodLocatingFcn() : IBAMR::LSInitStrategy
- registerKinematicsFunction() : IBAMR::IBFEDirectForcingKinematics
- registerLagrangianAO() : IBTK::LSiloDataWriter
- registerLagSurfaceForceFunction() : IBAMR::IIMethod
- registerLagSurfacePressureFunction() : IBAMR::IIMethod
- registerLInitStrategy() : IBAMR::IBInterpolantMethod, IBAMR::IBMethod, IBTK::LDataManager
- registerLiquidFractionVariable() : IBAMR::AllenCahnHierarchyIntegrator
- registerLoadBalancer() : IBAMR::IBHierarchyIntegrator, IBAMR::IBMethod, IBAMR::IBStrategy, IBAMR::IBStrategySet, IBAMR::IIMethod, IBTK::HierarchyIntegrator, IBTK::LDataManager
- registerLogicallyCartesianBlock() : IBTK::LSiloDataWriter
- registerLogicallyCartesianMultiblock() : IBTK::LSiloDataWriter
- registerLSiloDataWriter() : IBAMR::IBInterpolantMethod, IBAMR::IBMethod, IBAMR::IBRedundantInitializer, IBTK::LDataManager
- registerMarangoniCoefficientFunction() : IBAMR::MarangoniSurfaceTensionForceFunction
- registerMarkerCloud() : IBTK::LSiloDataWriter
- registerMassDensityInitialConditions() : IBAMR::INSVCStaggeredHierarchyIntegrator
- registerMassDensitySourceTerm() : IBAMR::INSVCStaggeredConservativeHierarchyIntegrator
- registerMassDensityVariable() : IBAMR::INSVCStaggeredHierarchyIntegrator
- registerMobilityMat() : IBAMR::DirectMobilitySolver
- registerModelVariables() : IBAMR::AdvectorPredictorCorrectorHyperbolicPatchOps
- registerOperatorFactoryFunction() : IBAMR::AdvDiffConvectiveOperatorManager, IBAMR::INSCollocatedConvectiveOperatorManager, IBAMR::INSStaggeredConvectiveOperatorManager
- registerParentHierarchyIntegrator() : IBTK::HierarchyIntegrator
- registerPeriodicShift() : IBTK::LNode, IBTK::LNodeIndex, IBTK::Streamable
- registerPhysicalBoundaryCondition() : IBAMR::LSInitStrategy
- registerPhysicalBoundaryConditions() : IBAMR::INSHierarchyIntegrator
- registerPostprocessIntegrateHierarchyCallback() : IBTK::HierarchyIntegrator
- registerPostProcessSolveFluidEquationsCallBackFunction() : IBAMR::ConstraintIBMethod
- registerPreprocessIntegrateHierarchyCallback() : IBTK::HierarchyIntegrator
- registerPreProcessSolveFluidEquationsCallBackFcn() : IBAMR::CIBMethod
- registerPreProcessSolveFluidEquationsCallBackFunction() : IBAMR::ConstraintIBMethod
- registerPressureInitialConditions() : IBAMR::INSHierarchyIntegrator
- registerPressureJumpNormalization() : IBAMR::IIMethod
- registerProlongRefineAlgorithm() : IBAMR::IBStrategy, IBTK::HierarchyIntegrator
- registerRegridHierarchyCallback() : IBTK::HierarchyIntegrator
- registerResetFluidDensityFcn() : IBAMR::INSVCStaggeredHierarchyIntegrator
- registerResetFluidViscosityFcn() : IBAMR::INSVCStaggeredHierarchyIntegrator
- registerResetFunction() : IBAMR::AdvDiffHierarchyIntegrator
- registerSolverFactoryFunction() : IBAMR::StaggeredStokesSolverManager, IBTK::CCPoissonSolverManager, IBTK::KrylovLinearSolverManager, IBTK::NewtonKrylovSolverManager, IBTK::SCPoissonSolverManager
- registerSourceTerm() : IBAMR::AdvDiffHierarchyIntegrator, IBAMR::AdvectorPredictorCorrectorHyperbolicPatchOps
- registerSpringForceFunction() : IBAMR::IBStandardForceGen
- registerStructIDsWithMobilityMat() : IBAMR::DirectMobilitySolver
- registerStructure() : IBAMR::IBHydrodynamicForceEvaluator
- registerStructurePlotData() : IBAMR::IBHydrodynamicForceEvaluator
- registerSurfaceTensionCoefficientFunction() : IBAMR::SurfaceTensionForceFunction
- registerSurfaceTensionForceMasking() : IBAMR::SurfaceTensionForceFunction
- registerTangentialVelocityMotion() : IBAMR::IIMethod
- registerTransportedQuantity() : IBAMR::AdvDiffHierarchyIntegrator, IBAMR::AdvDiffSemiImplicitHierarchyIntegrator, IBAMR::AdvectorPredictorCorrectorHyperbolicPatchOps, IBAMR::BrinkmanAdvDiffSemiImplicitHierarchyIntegrator
- registerUnstructuredMesh() : IBTK::LSiloDataWriter
- registerUserDefinedLData() : IBTK::LDataManager
- registerVariable() : IBAMR::IBStrategy, IBTK::HierarchyIntegrator
- registerVariableAndHierarchyIntegrator() : IBAMR::IBInterpolantMethod
- registerVariableData() : IBTK::LSiloDataWriter
- registerVariables() : IBAMR::AdvDiffHierarchyIntegrator
- registerVelocityDivergenceFunction() : IBAMR::INSHierarchyIntegrator
- registerVelocityInitialConditions() : IBAMR::INSHierarchyIntegrator
- registerViscosityInitialConditions() : IBAMR::INSVCStaggeredHierarchyIntegrator
- registerViscosityVariable() : IBAMR::INSVCStaggeredHierarchyIntegrator
- registerVisItDataWriter() : IBAMR::AdvectorPredictorCorrectorHyperbolicPatchOps, IBAMR::CIBMethod, IBTK::HierarchyIntegrator, IBTK::LDataManager
- registerWithStreamableManager() : IBAMR::IBAnchorPointSpec, IBAMR::IBBeamForceSpec, IBAMR::IBInstrumentationSpec, IBAMR::IBRodForceSpec, IBAMR::IBSourceSpec, IBAMR::IBSpringForceSpec, IBAMR::IBTargetPointForceSpec
- regriddingHierarchy() : IBTK::HierarchyIntegrator
- regridHierarchy() : IBTK::HierarchyIntegrator
- regridHierarchyBeginSpecialized() : IBAMR::AllenCahnHierarchyIntegrator, IBAMR::IBExplicitHierarchyIntegrator, IBAMR::IBHierarchyIntegrator, IBAMR::INSStaggeredHierarchyIntegrator, IBAMR::INSVCStaggeredHierarchyIntegrator, IBTK::HierarchyIntegrator
- RegridHierarchyCallbackFcnPtr : IBTK::HierarchyIntegrator
- regridHierarchyEndSpecialized() : IBAMR::AllenCahnHierarchyIntegrator, IBAMR::IBExplicitHierarchyIntegrator, IBAMR::IBHierarchyIntegrator, IBAMR::INSStaggeredHierarchyIntegrator, IBAMR::INSVCStaggeredHierarchyIntegrator, IBTK::HierarchyIntegrator
- regridProjection() : IBAMR::INSCollocatedHierarchyIntegrator, IBAMR::INSHierarchyIntegrator, IBAMR::INSStaggeredHierarchyIntegrator, IBAMR::INSVCStaggeredConservativeHierarchyIntegrator, IBAMR::INSVCStaggeredNonConservativeHierarchyIntegrator
- reinit() : IBTK::LibMeshSystemIBVectors, IBTK::SecondaryHierarchy
- reinitializeOperatorState() : IBTK::HierarchyGhostCellInterpolation
- reinitLagrangianStructure() : IBTK::LDataManager
- reinitMidpointData() : IBAMR::IBMethod
- RelaxationLSBcCoefs() : IBAMR::RelaxationLSBcCoefs
- RelaxationLSMethod() : IBAMR::RelaxationLSMethod
- removeEdge() : IBTK::ParallelEdgeMap
- removeItem() : IBTK::ParallelMap, IBTK::ParallelSet
- removeNodeDataItem() : IBTK::LNode
- removeNullSpace() : IBAMR::INSStaggeredHierarchyIntegrator, IBAMR::INSVCStaggeredConservativeHierarchyIntegrator, IBAMR::INSVCStaggeredHierarchyIntegrator, IBAMR::INSVCStaggeredNonConservativeHierarchyIntegrator
- replaceSAMRAIVector() : IBTK::PETScSAMRAIVectorReal
- resetAnchorPointValues() : IBAMR::IBMethod
- resetBcCoefObjects() : IBAMR::StaggeredStokesPhysicalBoundaryHelper
- resetData() : IBTK::LData
- resetDataToPreadvanceState() : IBTK::StandardTagAndInitStrategySet
- ResetFluidPropertiesFcnPtr : IBAMR::INSVCStaggeredHierarchyIntegrator
- resetHierarchyConfiguration() : IBAMR::IBInterpolantMethod, IBAMR::IBLevelSetMethod, IBAMR::IBMethod, IBAMR::IBStrategy, IBAMR::IBStrategySet, IBAMR::IIMethod, IBTK::HierarchyIntegrator, IBTK::LDataManager, IBTK::StandardTagAndInitStrategySet
- resetHierarchyConfigurationSpecialized() : IBAMR::AdvDiffHierarchyIntegrator, IBAMR::AdvDiffPredictorCorrectorHierarchyIntegrator, IBAMR::AdvDiffSemiImplicitHierarchyIntegrator, IBAMR::IBHierarchyIntegrator, IBAMR::INSCollocatedHierarchyIntegrator, IBAMR::INSStaggeredHierarchyIntegrator, IBAMR::INSVCStaggeredConservativeHierarchyIntegrator, IBAMR::INSVCStaggeredHierarchyIntegrator, IBAMR::INSVCStaggeredNonConservativeHierarchyIntegrator, IBTK::HierarchyIntegrator
- resetIndex() : IBTK::FixedSizedStream
- resetIntegratorToPreadvanceState() : IBTK::HierarchyIntegrator
- resetIntegratorToPreadvanceStateSpecialized() : IBAMR::AdvDiffPredictorCorrectorHierarchyIntegrator, IBTK::HierarchyIntegrator
- resetLevels() : IBTK::HierarchyMathOps, IBTK::LSiloDataWriter, IBTK::SAMRAIDataCache
- resetLSPatchDataIndex() : IBAMR::RelaxationLSBcCoefs
- ResetPropertiesFcnPtr : IBAMR::AdvDiffHierarchyIntegrator
- resetSolverVectors() : IBAMR::INSStaggeredHierarchyIntegrator
- resetTimeDependentData() : IBTK::StandardTagAndInitStrategySet
- resetTimeDependentHierarchyData() : IBTK::HierarchyIntegrator
- resetTimeDependentHierarchyDataSpecialized() : IBAMR::AdvDiffPredictorCorrectorHierarchyIntegrator, IBTK::HierarchyIntegrator
- resetTransactionComponent() : IBTK::EdgeDataSynchronization, IBTK::FaceDataSynchronization, IBTK::HierarchyGhostCellInterpolation, IBTK::NodeDataSynchronization, IBTK::SideDataSynchronization
- resetTransactionComponents() : IBTK::EdgeDataSynchronization, IBTK::FaceDataSynchronization, IBTK::HierarchyGhostCellInterpolation, IBTK::NodeDataSynchronization, IBTK::SideDataSynchronization
- restoreArrays() : IBTK::LData
- restoreSAMRAIVector() : IBTK::PETScSAMRAIVectorReal
- restoreSAMRAIVectorRead() : IBTK::PETScSAMRAIVectorReal
- restrictResidual() : IBAMR::StaggeredStokesFACPreconditionerStrategy, IBTK::FACPreconditionerStrategy, IBTK::PoissonFACPreconditionerStrategy, IBTK::VCSCViscousOpPointRelaxationFACOperator
- rhoIsConstant() : IBAMR::INSVCStaggeredHierarchyIntegrator
- RobinPhysBdryPatchStrategy() : IBTK::RobinPhysBdryPatchStrategy
- rot() : IBTK::HierarchyMathOps, IBTK::PatchMathOps
- rotateArray() : IBAMR::CIBMethod, IBAMR::CIBStrategy